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Intron Name: Anas_platyrhynchos_platyrhynchos_15_17269079_17270123_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17269079 - 17270123

Intron Length:

1045

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCT|GTGAGTAAT

5'SS Class:

major

3'SS Sequence:

TTACTTTTCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTAAC

U12 Branch Point Sequence:

TAACATTTAACT

Flanking Amino Acid:

SRVVHAIANSGKLVIGHNML

Intron Amino Acid Position:

281

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.3

0.55

1.1

76.4

Major BPS

80.9

0.77

0.8

81.7

25.4

Major PPT

0.76

0.8

79.6

32.2

Minor 5ss

34.9

-1.7

52.2

44.4

Minor BPS

64.3

0.53

1.5

77.03

38.6

Associated Gene:

Gene:

PARN

Ensembl Gene ID:

ENSAPLG00000013914

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033374

17260164 - 17321036

60873

ENSAPLT00000014581

17256748 - 17293838

37091