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Intron Name: Anas_platyrhynchos_platyrhynchos_15_17271869_17273610_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17271869 - 17273610

Intron Length:

1742

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATTAA

5'SS Class:

strong_major

3'SS Sequence:

TCCTTTCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGTTAAT

U12 Branch Point Sequence:

TGGAAGTTAATG

Flanking Amino Acid:

KLMASTQPFKEIINNTSLAE

Intron Amino Acid Position:

336

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.6

0.89

0.9

82.6

24.7

Major BPS

75.6

0.64

1.1

75.7

36.5

Major PPT

88.4

0.86

0.7

83.9

24.2

Minor 5ss

38.9

-1.3

2.9

47.2

Minor BPS

44.4

-0.5

2.2

49.75

44.1

Associated Gene:

Gene:

PARN

Ensembl Gene ID:

ENSAPLG00000013914

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033374

17260164 - 17321036

60873

ENSAPLT00000014581

17256748 - 17293838

37091