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Intron Name: Anas_platyrhynchos_platyrhynchos_15_17273687_17275669_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17273687 - 17275669

Intron Length:

1983

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGGATA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCTTCTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACTCAT

U12 Branch Point Sequence:

TTGTTCACAAAG

Flanking Amino Acid:

KEVPFSPPKVESAEGFPSYD

Intron Amino Acid Position:

361

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.9

0.82

0.9

80.5

33.7

Major BPS

78.3

0.7

0.8

77.7

26.1

Major PPT

92.7

0.96

0.6

92.4

17.8

Minor 5ss

-1.6

3.3

45.4

43.9

Minor BPS

47.1

-0.3

57.68

43.5

Associated Gene:

Gene:

PARN

Ensembl Gene ID:

ENSAPLG00000013914

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033374

17260164 - 17321036

60873

ENSAPLT00000014581

17256748 - 17293838

37091