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Intron Name: Anas_platyrhynchos_platyrhynchos_15_17275781_17275865_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17275781 - 17275865

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTATCTACC

5'SS Class:

major

3'SS Sequence:

CTTTTTTTATCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTCAT

U12 Branch Point Sequence:

CTTTTTTTATCA

Flanking Amino Acid:

LCFISMANFLGSFLSPPKNH

Intron Amino Acid Position:

398

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.9

0.59

1.2

71.5

38.6

Major BPS

87.1

0.92

0.7

85.9

22.5

Major PPT

88.1

0.86

0.8

89.1

Minor 5ss

48.6

-0.1

2.1

64.2

Minor BPS

0.47

1.6

74.08

38.4

Associated Gene:

Gene:

PARN

Ensembl Gene ID:

ENSAPLG00000013914

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033374

17260164 - 17321036

60873

ENSAPLT00000014581

17256748 - 17293838

37091