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Intron Name: Anas_platyrhynchos_platyrhynchos_15_17281972_17286761_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17281972 - 17286761

Intron Length:

4790

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACT|GTAAGTAGC

5'SS Class:

major

3'SS Sequence:

TCTTGTTTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

TAATTCTTATTC

Flanking Amino Acid:

IPYLNLEGPDLQPKRDHVLH

Intron Amino Acid Position:

440

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.6

0.58

1.1

69.5

41.3

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

88.8

0.87

0.7

83.9

Minor 5ss

-1.2

2.8

55.8

41.5

Minor BPS

61.7

0.35

1.5

67.96

37.7

Associated Gene:

Gene:

PARN

Ensembl Gene ID:

ENSAPLG00000013914

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033374

17260164 - 17321036

60873

ENSAPLT00000014581

17256748 - 17293838

37091