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Intron Name: Anas_platyrhynchos_platyrhynchos_15_17286849_17293319_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17286849 - 17293319

Intron Length:

6471

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTGAGTAAT

5'SS Class:

strong_major

3'SS Sequence:

TTGCCTTTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCATAAC

U12 Branch Point Sequence:

GTGGTCATAACC

Flanking Amino Acid:

SDLYQLFSAFGNIQVSWIDD

Intron Amino Acid Position:

469

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.7

0.86

0.8

84.9

26.3

Major BPS

65.3

0.38

1.1

66.2

36.5

Major PPT

80.3

0.68

0.8

73.3

37.1

Minor 5ss

32.1

-2

2.8

39.2

40.5

Minor BPS

53.1

0.08

1.8

63.47

Associated Gene:

Gene:

PARN

Ensembl Gene ID:

ENSAPLG00000013914

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033374

17260164 - 17321036

60873

ENSAPLT00000014581

17256748 - 17293838

37091