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Intron Name: Anas_platyrhynchos_platyrhynchos_15_17318951_17320983_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17318951 - 17320983

Intron Length:

2033

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAAGCA

5'SS Class:

strong_major

3'SS Sequence:

ACTCCTTTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

AAATCTTTAATA

Flanking Amino Acid:

KKIKKEQVPAGSFTSSSTEI

Intron Amino Acid Position:

524

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

0.9

71.1

32.5

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

79.2

0.66

0.8

77.2

30.8

Minor 5ss

30.1

-2.3

3.3

39.5

45.9

Minor BPS

72.7

0.71

1.1

71.88

33.7

Associated Gene:

Gene:

PARN

Ensembl Gene ID:

ENSAPLG00000013914

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033374

17260164 - 17321036

60873