Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_15_17521933_17522613_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17521933 - 17522613

Intron Length:

681

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTAACAAAA

5'SS Class:

major

3'SS Sequence:

TGTTGTTCCTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAG

U12 Branch Point Sequence:

TTTTCAGTGATT

Flanking Amino Acid:

KEKEAFEKLIRERATMVVPE

Intron Amino Acid Position:

622

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.1

0.47

1.2

68.2

38.6

Major BPS

0.65

1.5

85.7

34.9

Major PPT

75.4

0.57

0.8

73.8

36.8

Minor 5ss

38.8

-1.3

2.9

49.8

46.3

Minor BPS

55.3

0.25

2.3

84.15

36.9

Associated Gene:

Gene:

ERCC4

Ensembl Gene ID:

ENSAPLG00000014154

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027658

17519998 - 17533180

13183

ENSAPLT00000014778

17519998 - 17533180

13183