Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_15_17532471_17533006_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17532471 - 17533006

Intron Length:

536

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGAGGA

5'SS Class:

strong_major

3'SS Sequence:

GCATTTGTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTTAC

U12 Branch Point Sequence:

TTTTACTGCATT

Flanking Amino Acid:

LVLNTSPAEEEYFIDQLRSD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.5

0.84

0.8

71.2

34.5

Major BPS

68.8

0.47

1.2

63.4

Major PPT

71.8

0.49

69.4

41.5

Minor 5ss

24.3

-3

3.1

29.7

43.1

Minor BPS

54.3

0.22

2.1

81.93

39.6

Associated Gene:

Gene:

ERCC4

Ensembl Gene ID:

ENSAPLG00000014154

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027658

17519998 - 17533180

13183

ENSAPLT00000014778

17519998 - 17533180

13183