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Intron Name: Anas_platyrhynchos_platyrhynchos_15_1806936_1839835_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1806936 - 1839835

Intron Length:

32900

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGCGC

5'SS Class:

strong_major

3'SS Sequence:

CTTTCCTGTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACTTCAA

U12 Branch Point Sequence:

GCAACTTCAACA

Flanking Amino Acid:

VHGVLQILFQVLLIISGNLS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.5

0.77

0.9

63.9

42.4

Major BPS

69.4

0.48

71.6

33.8

Major PPT

0.61

0.8

73.2

31.6

Minor 5ss

25.7

-2.8

3.1

32.8

42.2

Minor BPS

51.9

0.06

1.6

58.15

41.1

Associated Gene:

Gene:

LMF1

Ensembl Gene ID:

ENSAPLG00000003654

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003736

1782101 - 1897788

115688