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Intron Name: Anas_platyrhynchos_platyrhynchos_15_1840004_1893056_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1840004 - 1893056

Intron Length:

53053

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCAAT

5'SS Class:

strong_major

3'SS Sequence:

GTTCATCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTCAT

U12 Branch Point Sequence:

GTGTGTTCATCT

Flanking Amino Acid:

ELTCMDYHYETQPVPNPIAY

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.8

0.89

0.8

83.1

30.9

Major BPS

84.8

0.86

85.7

34.9

Major PPT

81.1

0.7

0.9

77.4

36.6

Minor 5ss

35.6

-1.6

47.8

47.9

Minor BPS

45.2

-0.2

2.1

64.49

Associated Gene:

Gene:

LMF1

Ensembl Gene ID:

ENSAPLG00000003654

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003736

1782101 - 1897788

115688