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Intron Name: Anas_platyrhynchos_platyrhynchos_15_199402_209252_F

Intron Information:

Intron Rank:

132021

Intron Class:

major

Intron Phase:

Intron Coordinates:

199402 - 209252

Intron Length:

9851

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTGAGTTGC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTCCCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGTTGAA

U12 Branch Point Sequence:

ATAAGTTGAAAC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

0.9

69.6

37.9

Major BPS

63.2

0.33

1.1

55.1

42.1

Major PPT

90.7

0.92

0.6

84.9

29.9

Minor 5ss

35.6

-1.6

2.9

44.4

43.5

Minor BPS

-0.4

1.9

52.81

37.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020911

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032829

198408 - 209331

10924