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Intron Name: Anas_platyrhynchos_platyrhynchos_15_199402_221520_F

Intron Information:

Intron Rank:

132022

Intron Class:

major

Intron Phase:

Intron Coordinates:

199402 - 221520

Intron Length:

22119

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTGAGTTGC

5'SS Class:

strong_major

3'SS Sequence:

CCTCTCTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTGGGAC

U12 Branch Point Sequence:

GGGTGCAGGAGT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

0.9

69.6

37.9

Major BPS

43.7

-0.3

1.4

38.2

41.7

Major PPT

82.1

0.72

0.7

76.4

25.6

Minor 5ss

35.6

-1.6

2.9

44.4

43.5

Minor BPS

36.9

-0.9

2.2

50.28

43.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020911

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039896

198408 - 221879

23472