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Intron Name: Anas_platyrhynchos_platyrhynchos_15_2161273_2164352_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2161273 - 2164352

Intron Length:

3080

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGAGTCAC

5'SS Class:

strong_major

3'SS Sequence:

TTGCTCGGTCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATCAT

U12 Branch Point Sequence:

GCCACGTTAATC

Flanking Amino Acid:

RQRASRTFTPLAQLKMSAVF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

68.8

Major BPS

80.4

0.76

80.3

31.8

Major PPT

69.8

0.45

1.1

61.6

44.5

Minor 5ss

29.6

-2.3

2.8

36.4

40.6

Minor BPS

48.3

-0.1

2.1

55.24

43.4

Associated Gene:

Gene:

C1QTNF8

Ensembl Gene ID:

ENSAPLG00000020620

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022287

2158536 - 2164563

6028