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Intron Name: Anas_platyrhynchos_platyrhynchos_15_2200981_2201781_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2200981 - 2201781

Intron Length:

801

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

GTATCCTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TTTTTTTTAAAC

Flanking Amino Acid:

KHKLEHHLKKTLKEIGDQEA

Intron Amino Acid Position:

399

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.2

0.9

0.8

88.1

25.2

Major BPS

90.4

0.7

90.2

19.3

Major PPT

80.7

0.69

0.9

77.4

36.6

Minor 5ss

40.3

-1.1

3.4

58.5

40.4

Minor BPS

76.4

0.81

1.2

82.98

29.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002857

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002894

2198725 - 2209684

10960