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Intron Name: Anas_platyrhynchos_platyrhynchos_15_2462075_2463943_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2462075 - 2463943

Intron Length:

1869

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATA|GTAAGTATG

5'SS Class:

major

3'SS Sequence:

TTGTTTTCTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTAAC

U12 Branch Point Sequence:

TCTCTGCTAACT

Flanking Amino Acid:

NFIYFILLIIVGSFFMINLC

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.4

0.69

77.3

37.6

Major BPS

69.4

0.48

1.1

69.6

35.5

Major PPT

88.2

0.86

0.8

81.3

36.4

Minor 5ss

41.2

-1

2.8

53.2

38.8

Minor BPS

48.1

-0

2.3

73.51

43.3

Associated Gene:

Gene:

CACNA1H

Ensembl Gene ID:

ENSAPLG00000013842

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030655

2462012 - 2547788

85777

ENSAPLT00000014513

2462012 - 2547788

85777