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Intron Name: Anas_platyrhynchos_platyrhynchos_15_2468622_2494299_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2468622 - 2494299

Intron Length:

25678

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTGCG

5'SS Class:

strong_major

3'SS Sequence:

TTTTGCCCCTTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTGAC

U12 Branch Point Sequence:

TGCACATCAATT

Flanking Amino Acid:

LSMGIEYHEQPDELTNALEI

Intron Amino Acid Position:

422

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.8

0.94

0.8

74.9

35.3

Major BPS

77.7

0.69

0.9

69.1

37.9

Major PPT

76.6

0.6

0.8

74.7

30.6

Minor 5ss

27.6

-2.6

32.2

42.5

Minor BPS

0.01

1.9

67.28

43.2

Associated Gene:

Gene:

CACNA1H

Ensembl Gene ID:

ENSAPLG00000013842

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014513

2462012 - 2547788

85777

ENSAPLT00000030655

2462012 - 2547788

85777