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Intron Name: Anas_platyrhynchos_platyrhynchos_15_2495634_2496323_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2495634 - 2496323

Intron Length:

690

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACCAGAG

5'SS Class:

major

3'SS Sequence:

TTTCCTACTCTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAATAAT

U12 Branch Point Sequence:

TTTTTCCTACTC

Flanking Amino Acid:

MLLMLFIFIFSILGMHLFGC

Intron Amino Acid Position:

534

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.6

0.39

1.2

57.1

42.4

Major BPS

67.7

0.44

1.1

67.9

34.4

Major PPT

78.6

0.64

0.8

71.2

34.4

Minor 5ss

34.2

-1.8

3.6

46.7

48.6

Minor BPS

56.6

0.19

1.9

74.28

36.9

Associated Gene:

Gene:

CACNA1H

Ensembl Gene ID:

ENSAPLG00000013842

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030655

2462012 - 2547788

85777

ENSAPLT00000014513

2462012 - 2547788

85777