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Intron Name: Anas_platyrhynchos_platyrhynchos_15_2505576_2506787_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2505576 - 2506787

Intron Length:

1212

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAGGTGTT

5'SS Class:

strong_major

3'SS Sequence:

TCTCCTCTCTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCAAAT

U12 Branch Point Sequence:

ACACCCTCAAAT

Flanking Amino Acid:

DPMSYDQKSLSSLRSSPCAN

Intron Amino Acid Position:

726

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

77.9

36.8

Major BPS

64.9

0.37

1.1

70.9

31.9

Major PPT

82.3

0.73

0.7

80.3

24.9

Minor 5ss

37.4

-1.4

3.6

54.1

45.6

Minor BPS

0.17

1.7

66.99

42.8

Associated Gene:

Gene:

CACNA1H

Ensembl Gene ID:

ENSAPLG00000013842

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014513

2462012 - 2547788

85777

ENSAPLT00000030655

2462012 - 2547788

85777