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Intron Name: Anas_platyrhynchos_platyrhynchos_15_2508552_2508690_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2508552 - 2508690

Intron Length:

139

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTGAGCACC

5'SS Class:

major

3'SS Sequence:

TTATGTTTTAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTAAAT

U12 Branch Point Sequence:

TATGTTTTAAAG

Flanking Amino Acid:

ERPDIDPHSTERVFLSVSNY

Intron Amino Acid Position:

946

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.3

0.62

66.2

39.6

Major BPS

82.3

0.8

0.9

87.6

25.7

Major PPT

74.1

0.54

1.1

74.7

Minor 5ss

35.7

-1.6

2.9

45.4

42.5

Minor BPS

0.08

1.6

60.98

41.1

Associated Gene:

Gene:

CACNA1H

Ensembl Gene ID:

ENSAPLG00000013842

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030655

2462012 - 2547788

85777

ENSAPLT00000014513

2462012 - 2547788

85777