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Intron Name: Anas_platyrhynchos_platyrhynchos_15_2508760_2508869_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2508760 - 2508869

Intron Length:

110

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATTATA

5'SS Class:

strong_major

3'SS Sequence:

CTCCTGGCTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTAAAT

U12 Branch Point Sequence:

GCAGATTTAAAT

Flanking Amino Acid:

AIFVAEMMVKVVALGFFSGE

Intron Amino Acid Position:

969

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.7

0.91

0.9

24.5

Major BPS

82.3

0.8

0.9

87.6

25.7

Major PPT

67.3

0.39

0.9

61.1

35.1

Minor 5ss

39.4

-1.2

2.8

51.5

Minor BPS

47.9

-0

1.7

59.64

43.4

Associated Gene:

Gene:

CACNA1H

Ensembl Gene ID:

ENSAPLG00000013842

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014513

2462012 - 2547788

85777

ENSAPLT00000030655

2462012 - 2547788

85777