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Intron Name: Anas_platyrhynchos_platyrhynchos_15_2511372_2511959_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2511372 - 2511959

Intron Length:

588

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGAGTAT

5'SS Class:

major

3'SS Sequence:

TTCTCAAATACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAA

U12 Branch Point Sequence:

TGCTTCTCAAAT

Flanking Amino Acid:

FIIFGILGVQLFKGKFYYCD

Intron Amino Acid Position:

1073

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.4

0.53

1.1

38.3

Major BPS

85.7

0.89

0.8

85.9

22.5

Major PPT

73.1

0.52

66.8

37.5

Minor 5ss

36.4

-1.5

3.7

54.5

49.7

Minor BPS

58.6

0.35

1.7

74.04

42.5

Associated Gene:

Gene:

CACNA1H

Ensembl Gene ID:

ENSAPLG00000013842

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030655

2462012 - 2547788

85777

ENSAPLT00000014513

2462012 - 2547788

85777