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Intron Name: Anas_platyrhynchos_platyrhynchos_15_2512903_2513731_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2512903 - 2513731

Intron Length:

829

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATGTAC

5'SS Class:

strong_major

3'SS Sequence:

TCCACCTCACCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

TTCTCATTATTT

Flanking Amino Acid:

GLDAVGIDQQPIQNHNPWML

Intron Amino Acid Position:

1145

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.71

71.9

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

66.7

0.38

0.9

58.8

36.9

Minor 5ss

37.1

-1.5

3.3

49.8

46.8

Minor BPS

61.4

0.44

1.9

80.9

41.2

Associated Gene:

Gene:

CACNA1H

Ensembl Gene ID:

ENSAPLG00000013842

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030655

2462012 - 2547788

85777

ENSAPLT00000014513

2462012 - 2547788

85777