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Intron Name: Anas_platyrhynchos_platyrhynchos_15_2518_3409_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2518 - 3409

Intron Length:

892

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGGGT

5'SS Class:

strong_major

3'SS Sequence:

CTTTTCCCATTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

CTGTTTTTACTT

Flanking Amino Acid:

LKMGPVDKRKGLFARRRQLL

Intron Amino Acid Position:

471

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.4

0.93

0.9

76.9

38.6

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

75.6

0.58

0.8

75.6

28.2

Minor 5ss

30.9

-2.2

3.6

46.8

48.5

Minor BPS

56.4

0.28

1.6

70.08

42.4

Associated Gene:

Gene:

PDPK1

Ensembl Gene ID:

ENSAPLG00000015673

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016388

890 - 25912

25023

ENSAPLT00000048498

890 - 25429

24540