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Intron Name: Anas_platyrhynchos_platyrhynchos_15_2523933_2525058_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2523933 - 2525058

Intron Length:

1126

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAGTA

5'SS Class:

strong_major

3'SS Sequence:

CTCTCTTTGTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TCTTTTTTTATT

Flanking Amino Acid:

AFGFRRFFKDRWNQLDLAIV

Intron Amino Acid Position:

1296

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.5

0.8

84.3

26.3

Major BPS

96.5

1.15

0.6

34.2

Major PPT

0.56

0.9

76.4

32.2

Minor 5ss

-1.8

3.5

46.9

48.4

Minor BPS

63.1

0.49

1.6

78.47

38.5

Associated Gene:

Gene:

CACNA1H

Ensembl Gene ID:

ENSAPLG00000013842

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030655

2462012 - 2547788

85777

ENSAPLT00000014513

2462012 - 2547788

85777