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Intron Name: Anas_platyrhynchos_platyrhynchos_15_2525842_2535128_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2525842 - 2535128

Intron Length:

9287

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCCTC

5'SS Class:

strong_major

3'SS Sequence:

TCTCCTTGTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACCTCAA

U12 Branch Point Sequence:

CTTGCCTGACCC

Flanking Amino Acid:

LDTVVQALPQVGNLGLLFML

Intron Amino Acid Position:

1365

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.92

0.9

76.2

39.9

Major BPS

64.3

0.36

65.6

31.9

Major PPT

76.1

0.59

0.9

72.7

Minor 5ss

42.4

-0.8

3.1

59.1

45.6

Minor BPS

52.7

0.07

1.9

66.78

44.8

Associated Gene:

Gene:

CACNA1H

Ensembl Gene ID:

ENSAPLG00000013842

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030655

2462012 - 2547788

85777

ENSAPLT00000014513

2462012 - 2547788

85777