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Intron Name: Anas_platyrhynchos_platyrhynchos_15_2537357_2537837_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2537357 - 2537837

Intron Length:

481

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGTGTGCA

5'SS Class:

strong_major

3'SS Sequence:

CTCCCTGTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CATTAAT

U12 Branch Point Sequence:

ACTTCATTAATC

Flanking Amino Acid:

TGDNWNGIMKDTLRECTRED

Intron Amino Acid Position:

1432

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

0.9

72.9

31.4

Major BPS

79.4

0.73

0.9

79.6

29.1

Major PPT

77.6

0.62

0.8

71.7

32.7

Minor 5ss

33.6

-1.9

41.1

45.4

Minor BPS

68.8

0.57

1.6

73.94

36.9

Associated Gene:

Gene:

CACNA1H

Ensembl Gene ID:

ENSAPLG00000013842

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014513

2462012 - 2547788

85777

ENSAPLT00000030655

2462012 - 2547788

85777