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Intron Name: Anas_platyrhynchos_platyrhynchos_15_2542948_2545955_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2542948 - 2545955

Intron Length:

3008

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACCTACC

5'SS Class:

major

3'SS Sequence:

CTCTGTTTCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGGTGAT

U12 Branch Point Sequence:

GTGGTGATGACT

Flanking Amino Acid:

METYPCKSQRGSITSIRSQP

Intron Amino Acid Position:

1655

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.3

0.55

1.2

69.9

40.9

Major BPS

66.1

0.4

1.3

57.1

49.4

Major PPT

75.4

0.57

0.8

68.4

37.4

Minor 5ss

41.5

-0.9

2.8

55.7

41.4

Minor BPS

41.7

-0.5

2.3

59.8

Associated Gene:

Gene:

CACNA1H

Ensembl Gene ID:

ENSAPLG00000013842

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030655

2462012 - 2547788

85777

ENSAPLT00000014513

2462012 - 2547788

85777