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Intron Name: Anas_platyrhynchos_platyrhynchos_15_2579302_2589099_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2579302 - 2589099

Intron Length:

9798

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTAAGTACA

5'SS Class:

major

3'SS Sequence:

TTGTTTCCGACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATAAT

U12 Branch Point Sequence:

TCATTTATAATC

Flanking Amino Acid:

SGGSPASYHGSTSPRVSSEL

Intron Amino Acid Position:

199

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.9

0.61

1.1

36.3

Major BPS

87.8

0.94

0.9

86.6

28.1

Major PPT

76.4

0.59

73.2

37.3

Minor 5ss

38.9

-1.2

2.7

53.8

42.8

Minor BPS

54.9

0.13

1.5

63.11

36.9

Associated Gene:

Gene:

EPN2

Ensembl Gene ID:

ENSAPLG00000013138

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021203

2566874 - 2589874

23001

ENSAPLT00000045390

2566874 - 2589874

23001

ENSAPLT00000021049

2570785 - 2589723

18939

ENSAPLT00000039632

2561088 - 2589874

28787

ENSAPLT00000013707

2550721 - 2589723

39003

ENSAPLT00000036800

2566874 - 2589874

23001

ENSAPLT00000025431

2561779 - 2589874

28096