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Intron Name: Anas_platyrhynchos_platyrhynchos_15_2627386_2628385_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2627386 - 2628385

Intron Length:

1000

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTGAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

GCTCCATCTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCACAT

U12 Branch Point Sequence:

CGTGCTCCATCT

Flanking Amino Acid:

SAPGEFSVSVNYGQHVQHFK

Intron Amino Acid Position:

100

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

0.9

72.1

31.2

Major BPS

59.9

0.25

1.2

38.9

Major PPT

73.4

0.53

0.9

65.9

34.8

Minor 5ss

30.2

-2.3

3.1

36.2

34.2

Minor BPS

40.8

-0.6

57.23

45.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012882

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013414

2624994 - 2629223

4230