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Intron Name: Anas_platyrhynchos_platyrhynchos_15_2692233_2692671_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2692233 - 2692671

Intron Length:

439

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGAGCC

5'SS Class:

strong_major

3'SS Sequence:

TCCCTTCCCCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAG

U12 Branch Point Sequence:

ACGTCCCGAGCT

Flanking Amino Acid:

MEPLDTNDPEVHSIIKKEKQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.8

0.84

0.8

72.1

31.2

Major BPS

67.4

0.43

1.5

65.3

43.7

Major PPT

65.1

0.34

63.4

31.8

Minor 5ss

26.3

-2.7

3.1

33.4

Minor BPS

46.3

-0.2

64.22

45.6

Associated Gene:

Gene:

SHMT1

Ensembl Gene ID:

ENSAPLG00000011293

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036779

2692112 - 2696514

4403

ENSAPLT00000011777

2692112 - 2695818

3707