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Intron Name: Anas_platyrhynchos_platyrhynchos_15_2692818_2693091_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2692818 - 2693091

Intron Length:

274

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACGGGGC

5'SS Class:

major

3'SS Sequence:

TATTTTCTGGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGAAT

U12 Branch Point Sequence:

CCTGCCCTATTT

Flanking Amino Acid:

NKYSEGYPGQRYYGGTEFVD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.3

0.67

65.7

Major BPS

74.6

0.61

1.4

34.5

Major PPT

80.2

0.68

77.5

36.5

Minor 5ss

28.5

-2.5

3.6

41.2

45.5

Minor BPS

46.7

-0.1

63.76

Associated Gene:

Gene:

SHMT1

Ensembl Gene ID:

ENSAPLG00000011293

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036779

2692112 - 2696514

4403

ENSAPLT00000011777

2692112 - 2695818

3707