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Intron Name: Anas_platyrhynchos_platyrhynchos_15_2693208_2693294_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2693208 - 2693294

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACGGCA

5'SS Class:

major

3'SS Sequence:

CCCCTCCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTCAC

U12 Branch Point Sequence:

CCCCCCTCACCA

Flanking Amino Acid:

KWGVNVQPYSGSPANFAVYT

Intron Amino Acid Position:

121

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.7

0.61

1.2

66.7

39.1

Major BPS

60.1

0.25

1.1

62.9

34.3

Major PPT

70.9

0.47

0.7

64.7

23.9

Minor 5ss

-1.7

3.5

47.9

47.8

Minor BPS

46.5

-0.2

1.9

52.44

45.6

Associated Gene:

Gene:

SHMT1

Ensembl Gene ID:

ENSAPLG00000011293

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036779

2692112 - 2696514

4403

ENSAPLT00000011777

2692112 - 2695818

3707