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Intron Name: Anas_platyrhynchos_platyrhynchos_15_2693675_2693845_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2693675 - 2693845

Intron Length:

171

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGGAT

5'SS Class:

strong_major

3'SS Sequence:

CTTCTCCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCGCAAT

U12 Branch Point Sequence:

GTCCCCGCAATG

Flanking Amino Acid:

RLFHPKLIIAGVSCYSRNLD

Intron Amino Acid Position:

202

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.97

0.8

82.1

Major BPS

44.8

-0.3

1.4

42.2

Major PPT

78.8

0.65

0.7

73.4

24.8

Minor 5ss

30.9

-2.2

3.6

45.9

49.3

Minor BPS

-0.5

2.2

49.73

44.3

Associated Gene:

Gene:

SHMT1

Ensembl Gene ID:

ENSAPLG00000011293

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036779

2692112 - 2696514

4403

ENSAPLT00000011777

2692112 - 2695818

3707