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Intron Name: Anas_platyrhynchos_platyrhynchos_15_2694656_2694963_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2694656 - 2694963

Intron Length:

308

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAAGGGGC

5'SS Class:

major

3'SS Sequence:

CTTTTCTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTCAC

U12 Branch Point Sequence:

TTCACTCCAACC

Flanking Amino Acid:

LMELGYDIVTGGSDNHLILL

Intron Amino Acid Position:

353

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.3

0.67

1.1

65.4

40.4

Major BPS

73.5

0.58

0.9

75.4

28.3

Major PPT

92.5

0.96

0.6

88.1

21.6

Minor 5ss

29.1

-2.4

3.5

32.5

42.6

Minor BPS

48.7

-0.1

1.9

64.09

41.4

Associated Gene:

Gene:

SHMT1

Ensembl Gene ID:

ENSAPLG00000011293

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011777

2692112 - 2695818

3707