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Intron Name: Anas_platyrhynchos_platyrhynchos_15_2705396_2706430_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2705396 - 2706430

Intron Length:

1035

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAGGAACA

5'SS Class:

major

3'SS Sequence:

CTTTTCCTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACTTAG

U12 Branch Point Sequence:

GCAGCCAGAAAC

Flanking Amino Acid:

DLLSNSRMRRREGFSKFNKI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.6

0.53

1.1

65.3

40.7

Major BPS

50.9

0.02

1.4

49.4

37.6

Major PPT

0.88

0.7

81.1

30.9

Minor 5ss

31.9

-2.1

3.1

32.7

41.8

Minor BPS

42.7

-0.5

1.8

47.52

Associated Gene:

Gene:

TOP3A

Ensembl Gene ID:

ENSAPLG00000006039

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025703

2705149 - 2714699

9551

ENSAPLT00000006340

2705149 - 2715699

10551