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Intron Name: Anas_platyrhynchos_platyrhynchos_15_2707295_2707841_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2707295 - 2707841

Intron Length:

547

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTTGT

5'SS Class:

strong_major

3'SS Sequence:

TTTCTGGTCTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTCAT

U12 Branch Point Sequence:

CGTGTCTCATTC

Flanking Amino Acid:

YCPENYVDIKRTLEREVQQC

Intron Amino Acid Position:

133

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.4

0.9

80.5

Major BPS

77.2

0.67

1.2

79.6

35.6

Major PPT

78.7

0.65

0.9

76.4

37.6

Minor 5ss

-0.2

2.5

67.3

43.8

Minor BPS

44.1

-0.4

1.8

50.24

41.1

Associated Gene:

Gene:

TOP3A

Ensembl Gene ID:

ENSAPLG00000006039

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025703

2705149 - 2714699

9551

ENSAPLT00000006340

2705149 - 2715699

10551