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Intron Name: Anas_platyrhynchos_platyrhynchos_15_2707951_2708255_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2707951 - 2708255

Intron Length:

305

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGTGTAGA

5'SS Class:

major

3'SS Sequence:

TCCCCTCTTACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGTAT

U12 Branch Point Sequence:

TATCACTTAAGT

Flanking Amino Acid:

GFEIIHVCKAVKPNLQVFRA

Intron Amino Acid Position:

169

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.1

0.61

0.9

68.5

37.8

Major BPS

71.5

0.53

1.4

71.7

44.6

Major PPT

81.5

0.71

0.7

75.3

26.9

Minor 5ss

35.9

-1.6

2.6

41.4

Minor BPS

62.1

0.46

1.8

80.12

41.1

Associated Gene:

Gene:

TOP3A

Ensembl Gene ID:

ENSAPLG00000006039

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025703

2705149 - 2714699

9551

ENSAPLT00000006340

2705149 - 2715699

10551