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Intron Name: Anas_platyrhynchos_platyrhynchos_15_2708793_2709019_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2708793 - 2709019

Intron Length:

227

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGCTGG

5'SS Class:

major

3'SS Sequence:

GTTTTCAAAACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

GTTTTCAAAACA

Flanking Amino Acid:

FVPEAFYKIKVTHEHEDGNV

Intron Amino Acid Position:

274

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.2

0.69

62.3

44.7

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

68.6

0.42

40.7

Minor 5ss

49.3

-0

2.5

64.5

46.9

Minor BPS

55.6

0.17

1.9

72.69

39.1

Associated Gene:

Gene:

TOP3A

Ensembl Gene ID:

ENSAPLG00000006039

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025703

2705149 - 2714699

9551

ENSAPLT00000006340

2705149 - 2715699

10551