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Intron Name: Anas_platyrhynchos_platyrhynchos_15_2709121_2709251_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2709121 - 2709251

Intron Length:

131

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGAGAG

5'SS Class:

strong_major

3'SS Sequence:

ATTCTGCATTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTCAA

U12 Branch Point Sequence:

TTTTGCTTATTC

Flanking Amino Acid:

CLVLYHMCMEDPVATVVEVG

Intron Amino Acid Position:

308

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.71

40.1

Major BPS

78.2

0.7

79.9

32.6

Major PPT

0.45

0.9

67.4

38.8

Minor 5ss

28.4

-2.5

3.5

47.6

Minor BPS

62.6

0.37

77.93

38.5

Associated Gene:

Gene:

TOP3A

Ensembl Gene ID:

ENSAPLG00000006039

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025703

2705149 - 2714699

9551

ENSAPLT00000006340

2705149 - 2715699

10551