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Intron Name: Anas_platyrhynchos_platyrhynchos_15_2709327_2709447_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2709327 - 2709447

Intron Length:

121

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTATGTTTG

5'SS Class:

strong_major

3'SS Sequence:

CCTCCCAACACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACAAAT

U12 Branch Point Sequence:

CTCCTCCCAACA

Flanking Amino Acid:

KWRPLPLDTVELEKLASRKL

Intron Amino Acid Position:

333

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

73.2

38.4

Major BPS

57.1

0.18

62.9

30.6

Major PPT

64.4

0.33

0.9

57.7

30.7

Minor 5ss

50.3

0.01

2.4

63.2

42.8

Minor BPS

46.3

-0.2

1.9

57.29

Associated Gene:

Gene:

TOP3A

Ensembl Gene ID:

ENSAPLG00000006039

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025703

2705149 - 2714699

9551

ENSAPLT00000006340

2705149 - 2715699

10551