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Intron Name: Anas_platyrhynchos_platyrhynchos_15_2709531_2709639_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2709531 - 2709639

Intron Length:

109

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGAGAG

5'SS Class:

strong_major

3'SS Sequence:

TGTCTTTCTTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTCAG

U12 Branch Point Sequence:

CACTTCTTCAGT

Flanking Amino Acid:

MKIAEKLYTQGFISYPRTET

Intron Amino Acid Position:

360

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

40.1

Major BPS

63.4

0.33

1.6

73.6

41.8

Major PPT

75.3

0.57

79.5

32.8

Minor 5ss

29.3

-2.4

3.3

Minor BPS

-0

2.1

63.69

46.9

Associated Gene:

Gene:

TOP3A

Ensembl Gene ID:

ENSAPLG00000006039

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025703

2705149 - 2714699

9551

ENSAPLT00000006340

2705149 - 2715699

10551