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Intron Name: Anas_platyrhynchos_platyrhynchos_15_2712479_2712757_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2712479 - 2712757

Intron Length:

279

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTCAC

5'SS Class:

strong_major

3'SS Sequence:

CCTTTCCTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGTAT

U12 Branch Point Sequence:

TAGGTTTGTATT

Flanking Amino Acid:

CAECGPHPVHRLKFKFKRGS

Intron Amino Acid Position:

717

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.7

0.82

72.3

39.5

Major BPS

71.5

0.53

1.4

71.7

44.6

Major PPT

82.9

0.74

0.7

81.1

24.1

Minor 5ss

33.1

-1.9

3.2

43.3

44.4

Minor BPS

43.2

-0.4

1.7

56.53

Associated Gene:

Gene:

TOP3A

Ensembl Gene ID:

ENSAPLG00000006039

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025703

2705149 - 2714699

9551

ENSAPLT00000006340

2705149 - 2715699

10551