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Intron Name: Anas_platyrhynchos_platyrhynchos_15_2713077_2713199_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

2713077 - 2713199

Intron Length:

123

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGTGCAAC

5'SS Class:

major

3'SS Sequence:

GGCTAACGAGCAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GTAACAA

U12 Branch Point Sequence:

ATACCTGCAATT

Flanking Amino Acid:

AAPDNGNNAVSEDRSNAAPR

Intron Amino Acid Position:

824

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.3

0.48

62.8

37.3

Major BPS

47.6

-0.1

1.2

55.4

40.4

Major PPT

51.2

0.03

1.1

44.4

41.2

Minor 5ss

40.5

-1.1

2.8

47.8

42.7

Minor BPS

45.6

-0.2

2.1

64.9

39.8

Associated Gene:

Gene:

TOP3A

Ensembl Gene ID:

ENSAPLG00000006039

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025703

2705149 - 2714699

9551