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Intron Name: Anas_platyrhynchos_platyrhynchos_15_2713492_2714520_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2713492 - 2714520

Intron Length:

1029

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGCTG

5'SS Class:

strong_major

3'SS Sequence:

CGTTCCTTTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

AGGTATTTAAAT

Flanking Amino Acid:

FQWADENAAPGASGDASWNH

Intron Amino Acid Position:

962

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.9

73.4

43.3

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

78.6

0.64

0.8

73.2

31.6

Minor 5ss

34.4

-1.8

3.4

46.7

48.6

Minor BPS

56.3

0.28

1.6

69.58

40.9

Associated Gene:

Gene:

TOP3A

Ensembl Gene ID:

ENSAPLG00000006039

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025703

2705149 - 2714699

9551

ENSAPLT00000006340

2705149 - 2715699

10551