Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_15_2725449_2725526_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2725449 - 2725526

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGGGGG

5'SS Class:

strong_major

3'SS Sequence:

CCTGTCCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGGTGAC

U12 Branch Point Sequence:

GCGTGGTGACCC

Flanking Amino Acid:

VAQEKNKKIEESGEAKAPDL

Intron Amino Acid Position:

410

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.9

67.8

43.5

Major BPS

56.2

0.15

1.3

48.8

46.3

Major PPT

0.5

0.8

65.4

30.4

Minor 5ss

28.6

-2.5

3.5

37.8

47.1

Minor BPS

36.1

-1

2.4

43.13

44.3

Associated Gene:

Gene:

FLII

Ensembl Gene ID:

ENSAPLG00000006754

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040162

2720875 - 2754022

33148

ENSAPLT00000019916

2720875 - 2728797

7923

ENSAPLT00000007036

2720875 - 2728797

7923

ENSAPLT00000042859

2720875 - 2736997

16123