Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_15_2726013_2726092_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2726013 - 2726092

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGGCCA

5'SS Class:

major

3'SS Sequence:

TCCTTTCTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTCAC

U12 Branch Point Sequence:

CCACCCTCACCG

Flanking Amino Acid:

MGDESDEFLQVFDNDISYIE

Intron Amino Acid Position:

541

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.9

0.56

59.3

41.4

Major BPS

77.7

0.69

30.2

Major PPT

85.3

0.79

0.6

84.5

23.4

Minor 5ss

24.2

-3

3.2

43.1

Minor BPS

45.1

-0.5

1.9

45.75

46.3

Associated Gene:

Gene:

FLII

Ensembl Gene ID:

ENSAPLG00000006754

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042859

2720875 - 2736997

16123

ENSAPLT00000040162

2720875 - 2754022

33148

ENSAPLT00000019916

2720875 - 2728797

7923

ENSAPLT00000007036

2720875 - 2728797

7923