Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_15_2733901_2734038_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2733901 - 2734038

Intron Length:

138

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGGATT

5'SS Class:

strong_major

3'SS Sequence:

CCCCTCCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCCCAC

U12 Branch Point Sequence:

TGTCCCCCACCG

Flanking Amino Acid:

KMVVAGTAGQVLVMELSDEK

Intron Amino Acid Position:

600

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.8

0.8

82.5

Major BPS

-0.3

1.2

49.7

35.3

Major PPT

70.9

0.47

0.7

64.7

23.9

Minor 5ss

36.8

-1.5

3.6

56.4

Minor BPS

44.1

-0.5

2.1

55.17

45.2

Associated Gene:

Gene:

LLGL1

Ensembl Gene ID:

ENSAPLG00000021642

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039465

2731798 - 2741211

9414

ENSAPLT00000017516

2731798 - 2741211

9414