Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_15_2737378_2739982_R

Intron Information:

Intron Rank:

Intron Class:

minor

Intron Phase:

Intron Coordinates:

2737378 - 2739982

Intron Length:

2605

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTATCCTTC

5'SS Class:

strong_minor

3'SS Sequence:

ACGCCCCCCCCAG|A

3'SS Class:

strong_BPS

U2 Branch Point Sequence:

TCCTTAA

U12 Branch Point Sequence:

GCTTCCTTAACG

Flanking Amino Acid:

AIGTKAGAVKLYGAPGVELT

Intron Amino Acid Position:

128

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

49.2

-0

1.3

50.1

41.8

Major BPS

69.7

0.49

59.9

38.5

Major PPT

61.7

0.26

0.9

50.9

33.4

Minor 5ss

95.2

1.52

0.7

94.3

17.7

Minor BPS

80.9

0.83

1.3

76.24

41.3

Associated Gene:

Gene:

LLGL1

Ensembl Gene ID:

ENSAPLG00000021642

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039465

2731798 - 2741211

9414

ENSAPLT00000017516

2731798 - 2741211

9414