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Intron Name: Anas_platyrhynchos_platyrhynchos_15_2776385_2815106_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

5UTR

Intron Coordinates:

2776385 - 2815106

Intron Length:

38722

Sequence Information:

Terminal Dinucleotides:

GT-AT

5'SS Sequence:

GAG|GTCGAGCAG

5'SS Class:

weak_major

3'SS Sequence:

GGAGGCCGAAGAT|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GGCTGAG

U12 Branch Point Sequence:

GGAGGCCGAAGA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

53.1

0.07

1.4

44.7

Major BPS

43.9

-0.3

1.6

36.8

44.4

Major PPT

21.6

-1.6

3.1

20.5

30.8

Minor 5ss

23.5

-3.1

3.2

43.5

Minor BPS

34.5

-1.1

2.1

39.45

39.4

Associated Gene:

Gene:

ATPAF2

Ensembl Gene ID:

ENSAPLG00000007932

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008252

2776379 - 2820248

43870